HEST
Benchmarks
| Task Name | Dataset Name | SOTA Result | Trend | |
|---|---|---|---|---|
| Regression | HEST | Average Pearson Correlation0.431 | 13 | |
| Spatial Transcriptomics Prediction | HEST (test) | Idc0.6106 | 11 | |
| Gene expression estimation | HEST 1k (test) | IDC0.51 | 7 | |
| H&E to Spatial Transcriptomics (HE2ST) | HEST-1k | MAPE1.049 | 6 | |
| Spatial gene expression prediction | HEST-1k HER2ST cohort (test) | PCC0.7058 | 6 | |
| Spatial Transcriptomics prediction | HEST-1k bowel (test) | PCC0.242 | 6 | |
| Spatial Transcriptomics prediction | HEST-1k skin (test) | PCC0.153 | 6 | |
| Spatial Transcriptomics prediction | HEST-1k breast (test) | PCC0.176 | 6 | |
| Spatial transcriptomics prediction | HEST-1k bladder | PCC0.107 | 6 | |
| Spatial transcriptomics prediction | HEST-1k brain | PCC0.127 | 6 | |
| Spatial transcriptomics prediction | HEST-1k liver | PCC0.145 | 6 | |
| Spatial Transcriptomics Prediction | HEST-1K Colorectum 1.0 (test) | PCC@100.721 | 5 | |
| Spatial Transcriptomics to Spatial Transcriptomics (ST2ST) | HEST-1k 9,248 genes | MAPE1.048 | 4 | |
| H&E to H&E (HE2HE) | HEST-1k (9,248 genes) | MAPE1.094 | 4 | |
| H&E-to-ST Prediction | HEST | Training Time (s/slide)0.1 | 4 |
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