Nucleotide Transformer
Benchmarks
| Task Name | Dataset Name | SOTA Result | Trend | |
|---|---|---|---|---|
| Genomic sequence classification | Nucleotide Transformer Benchmark Human 500M (test) | MCC0.5653 | 42 | |
| Genomic sequence modeling | Nucleotide Transformer (NT) 2.5B multi-species | MCC57.16 | 39 | |
| Genomic sequence understanding | Nucleotide Transformer (NT) Downstream Tasks | Enhancer Activity Prediction Score61.4 | 11 | |
| Splice site identification | Nucleotide Transformer benchmark | Splice Acceptor Accuracy98.13 | 5 | |
| Regulatory element prediction | Nucleotide Transformer benchmark | Enhancer Accuracy57.95 | 5 | |
| Histone mark prediction | Nucleotide Transformer benchmark | H3 Accuracy84.47 | 5 | |
| Regulatory annotation | Nucleotide Transformer Benchmark (PNT) | AUROC95.14 | 3 | |
| Regulatory annotation | Nucleotide Transformer Benchmark PA | AUROC94.25 | 3 |
Showing 8 of 8 rows