PBMC

Benchmarks

Task Name	Dataset Name	SOTA Result
Perturbation prediction	PBMC	DE Overlap81	22
Single-cell Denoising	PBMC OpenProblems benchmark	Mean Score0.711	11
Clustering	PBMC 3k	ARI92	9
Gene Representation Learning	PBMC (test)	Average Score92	9
Gene embedding	PBMC	Average Rank2.33	9
Cell type clustering	PBMC	ARI0.64	8
Representation Learning	PBMC3k	Rec Score88	7
scRNA-seq integration	pbmc	Batch Correction88.6	7
Biological process inference	pbmc3k	Mean LLM Confidence Score90.21	6
Gene rank reconstruction	PBMC12k	L-Dist6	6
Denoising	PBMC10k	SCC0.916	6
Multi-batch integration	PBMC12k	Batch Score0.9755	5
Clustering	PBMC	Homogeneity79.8	5
scRNA-seq clustering	pbmc	Clusters Used100	3
Conditional scATAC-seq Generation	PBMC10k	SCC0.846	3
Unconditional scATAC-seq Generation	PBMC 10k	SCC0.964	3
Gene expression count profile deconvolution	PBMC (10% held-out individuals)	MMD0.446	2
Missing data recovery	PBMC	Metric-	0

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