Perturb-seq
Benchmarks
| Task Name | Dataset Name | SOTA Result | Trend | |
|---|---|---|---|---|
| Node Regression | Perturb-seq (test) | Test Loss3.56 | 6 | |
| Gene perturbation representation learning | Perturb-seq CORUM | Recall30.75 | 3 | |
| Gene perturbation representation learning | Perturb-seq SIGNOR | Recall22.68 | 3 | |
| Gene perturbation representation learning | Perturb-seq REACT | Recall19.15 | 3 | |
| Gene perturbation representation learning | Perturb-seq GWAS hits (20) | Recall9.85 | 3 | |
| Gene perturbation representation learning | Perturb-seq GWAS hits (10) | Recall9.69 | 3 | |
| Gene perturbation representation learning | Perturb-seq GWAS hits (5) | Recall9.51 | 3 | |
| Gene perturbation representation learning | Perturb-seq GO BP (20) | Recall11.8 | 3 | |
| Gene perturbation representation learning | Perturb-seq GO BP (10) | Recall12.09 | 3 | |
| Gene perturbation representation learning | Perturb-seq GO BP (5) | Recall11.71 | 3 | |
| Gene perturbation representation learning | Perturb-seq Cell Marker (20) | Recall9.82 | 3 | |
| Gene perturbation representation learning | Perturb-seq Cell Marker (10) | Recall9.63 | 3 | |
| Gene perturbation representation learning | Perturb-seq Cell Marker | Recall9.2 | 3 |
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