PerturbQA
Benchmarks
| Task Name | Dataset Name | SOTA Result | Trend | |
|---|---|---|---|---|
| Gene regulation direction prediction | PerturbQA Jurkat | AUROC0.68 | 18 | |
| Gene regulation direction prediction | PerturbQA (HepG2) | AUROC0.72 | 18 | |
| Gene regulation direction prediction | PerturbQA RPE1 | AUROC0.73 | 18 | |
| Gene regulation direction prediction | PerturbQA K562 | AUROC0.65 | 18 | |
| Differential expression | PerturbQA (HepG2) | AUROC0.74 | 9 | |
| Differential expression | PerturbQA (RPE1) | AUROC78 | 9 | |
| Differential expression | PerturbQA (K562) | AUROC0.7 | 9 | |
| Degree of Change | PerturbQA RPE1 | Accuracy74.95 | 6 | |
| Differential Expression | PerturbQA RPE1 | Accuracy53.06 | 6 | |
| Degree of Change | PerturbQA K562 | Accuracy88.32 | 6 | |
| Differential Expression | PerturbQA K562 | Accuracy58.1 | 6 | |
| Degree of Change | PerturbQA Jurkat | Accuracy69.53 | 6 | |
| Differential Expression | PerturbQA Jurkat | Accuracy62.33 | 6 | |
| Degree of Change | PerturbQA HepG2 | Accuracy79.89 | 6 | |
| Differential Expression | PerturbQA HepG2 | Accuracy61.84 | 6 | |
| Single-cell perturbation response prediction | PerturbQA K562 | Overall AUROC0.888 | 4 |
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