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Equivariant Flows: sampling configurations for multi-body systems with symmetric energies

About

Flows are exact-likelihood generative neural networks that transform samples from a simple prior distribution to the samples of the probability distribution of interest. Boltzmann Generators (BG) combine flows and statistical mechanics to sample equilibrium states of strongly interacting many-body systems such as proteins with 1000 atoms. In order to scale and generalize these results, it is essential that the natural symmetries of the probability density - in physics defined by the invariances of the energy function - are built into the flow. Here we develop theoretical tools for constructing such equivariant flows and demonstrate that a BG that is equivariant with respect to rotations and particle permutations can generalize to sampling nontrivially new configurations where a nonequivariant BG cannot.

Jonas K\"ohler, Leon Klein, Frank No\'e• 2019

Related benchmarks

TaskDatasetResultRank
Force PredictionMD17 (test)
Aspirin Force Error10.9
39
Atomic force predictionMD17 (test)--
22
Future state predictionM-complex Single System (3, 3)
Prediction Error (MSE)0.142
10
Future state predictionM-complex Single System (5, 10)
MSE (x10^-2)17.08
10
Particle position estimationN-body system
MSE0.0104
9
State-to-State (S2S) PredictionMD17
S2S Prediction Error (Aspirin)10.94
9
Position Regressionn-body (test)
Position MSE0.0104
9
S2S (T=1) 3D Joint Trajectory PredictionCMU Motion Capture Walk, Subject #35 Graphics Lab 2003 (test)
F-MSE93.1
9
S2S (T=1) 3D Joint Trajectory PredictionCMU Motion Capture Run, Subject #9 2003 (test)
F-MSE9.06
9
State-to-state predictionMD17 (test)
RMSD (Aspirin)0.033
9
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