Equivariant message passing for the prediction of tensorial properties and molecular spectra
About
Message passing neural networks have become a method of choice for learning on graphs, in particular the prediction of chemical properties and the acceleration of molecular dynamics studies. While they readily scale to large training data sets, previous approaches have proven to be less data efficient than kernel methods. We identify limitations of invariant representations as a major reason and extend the message passing formulation to rotationally equivariant representations. On this basis, we propose the polarizable atom interaction neural network (PaiNN) and improve on common molecule benchmarks over previous networks, while reducing model size and inference time. We leverage the equivariant atomwise representations obtained by PaiNN for the prediction of tensorial properties. Finally, we apply this to the simulation of molecular spectra, achieving speedups of 4-5 orders of magnitude compared to the electronic structure reference.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Molecular property prediction | QM9 (test) | mu12 | 174 | |
| Molecular property prediction | QM9 | Cv0.023 | 70 | |
| Initial Structure to Relaxed Structure (IS2RS) | Open Catalyst OC20 (test) | AFbT0.117 | 32 | |
| Initial Structure to Relaxed Energy (IS2RE) | OC20 (Open Catalyst 2020) IS2RE (test) | Energy MAE (Avg)0.6763 | 30 | |
| S2EF (Structure to Energy and Forces) | OC20 average across all four splits (test) | Force MAE (meV/Å)33.1 | 27 | |
| Structure to Energy and Forces | OC20 S2EF 2M (val) | Energy MAE440 | 26 | |
| Force Prediction | MD17 (test) | Aspirin Force Error0.371 | 24 | |
| Molecular property prediction | COLL (test) | MAE (Energy)85.8 | 22 | |
| Molecular property prediction | QM9 2014 (test) | Dipole Moment (mu)0.012 | 20 | |
| Force Prediction | MD17 revised (test) | Force MAE (Aspirin)16.1 | 19 |