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Interpretable Machine Learning for Science with PySR and SymbolicRegression.jl

About

PySR is an open-source library for practical symbolic regression, a type of machine learning which aims to discover human-interpretable symbolic models. PySR was developed to democratize and popularize symbolic regression for the sciences, and is built on a high-performance distributed back-end, a flexible search algorithm, and interfaces with several deep learning packages. PySR's internal search algorithm is a multi-population evolutionary algorithm, which consists of a unique evolve-simplify-optimize loop, designed for optimization of unknown scalar constants in newly-discovered empirical expressions. PySR's backend is the extremely optimized Julia library SymbolicRegression.jl, which can be used directly from Julia. It is capable of fusing user-defined operators into SIMD kernels at runtime, performing automatic differentiation, and distributing populations of expressions to thousands of cores across a cluster. In describing this software, we also introduce a new benchmark, "EmpiricalBench," to quantify the applicability of symbolic regression algorithms in science. This benchmark measures recovery of historical empirical equations from original and synthetic datasets.

Miles Cranmer• 2023

Related benchmarks

TaskDatasetResultRank
Robot Dynamics ModelingWAM (test)
RMSE0.183
98
Dynamics ModelingBarrett WAM (train)
RMSE0.143
49
Symbolic RegressionE. coli growth LLM-SR Suite
NMSE0.151
44
Equation DiscoveryNavier-Stokes
MSE0.0799
36
Equation DiscoveryHeat conduction
MSE2.42e-4
36
Equation DiscoveryGravitational potential
MSE47.8105
36
Symbolic RegressionOscillator 1 (OOD)
NMSE2.55e-5
32
Symbolic RegressionOscillation 1 LLM-SR Suite
NMSE6.12e-12
30
Symbolic RegressionLung Cancer with Chemo & Radio (LC-CR) (test)
MSE0.399
22
Symbolic RegressionLSR-Synth
Overall Acc (Tol 0.01)29.46
22
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