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Efficient Prediction of SO(3)-Equivariant Hamiltonian Matrices via SO(2) Local Frames

About

We consider the task of predicting Hamiltonian matrices to accelerate electronic structure calculations, which plays an important role in physics, chemistry, and materials science. Motivated by the inherent relationship between the off-diagonal blocks of the Hamiltonian matrix and the SO(2) local frame, we propose a novel and efficient network, called QHNetV2, that achieves global SO(3) equivariance without the costly SO(3) Clebsch-Gordan tensor products. This is achieved by introducing a set of new efficient and powerful SO(2)-equivariant operations and performing all off-diagonal feature updates and message passing within SO(2) local frames, thereby eliminating the need of SO(3) tensor products. Moreover, a continuous SO(2) tensor product is performed within the SO(2) local frame at each node to fuse node features, mimicking the symmetric contraction operation. Extensive experiments on the large QH9 and MD17 datasets demonstrate that our model achieves superior performance across a wide range of molecular structures and trajectories, highlighting its strong generalization capability. The proposed SO(2) operations on SO(2) local frames offer a promising direction for scalable and symmetry-aware learning of electronic structures. Our code will be released as part of the AIRS library https://github.com/divelab/AIRS.

Haiyang Yu, Yuchao Lin, Xuan Zhang, Xiaofeng Qian, Shuiwang Ji• 2025

Related benchmarks

TaskDatasetResultRank
Hamiltonian and Orbital Property PredictionQH9 stable (in-distribution)
MAE (Hamiltonian all) [10^-6 Eh]31.5
6
Hamiltonian and Orbital Property PredictionQH9 stable (out-of-distribution)
MAE (Hamiltonian all)22.97
5
Hamiltonian matrix predictionMD17 Ethanol (test)
H Error (10^-6 Eh)12.05
4
Hamiltonian matrix predictionMD17 Malondialdehyde (test)
H ($10^{-6}$ Eh)10.85
4
Hamiltonian matrix predictionMD17 Uracil (test)
H Error ($10^{-6}$ Eh)10.38
4
Hamiltonian and Orbital Property PredictionQH9 geo dynamic (test)
MAE Diagonal Hamiltonian [10^-6 Eh]87.98
4
Hamiltonian matrix predictionMD17 Water (test)
H Error (10^-6 Eh)22.55
4
Hamiltonian matrix predictionQH9 stable-id
Memory Usage (GB/Sample)0.32
3
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