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Equivariant Graph Neural Operator for Modeling 3D Dynamics

About

Modeling the complex three-dimensional (3D) dynamics of relational systems is an important problem in the natural sciences, with applications ranging from molecular simulations to particle mechanics. Machine learning methods have achieved good success by learning graph neural networks to model spatial interactions. However, these approaches do not faithfully capture temporal correlations since they only model next-step predictions. In this work, we propose Equivariant Graph Neural Operator (EGNO), a novel and principled method that directly models dynamics as trajectories instead of just next-step prediction. Different from existing methods, EGNO explicitly learns the temporal evolution of 3D dynamics where we formulate the dynamics as a function over time and learn neural operators to approximate it. To capture the temporal correlations while keeping the intrinsic SE(3)-equivariance, we develop equivariant temporal convolutions parameterized in the Fourier space and build EGNO by stacking the Fourier layers over equivariant networks. EGNO is the first operator learning framework that is capable of modeling solution dynamics functions over time while retaining 3D equivariance. Comprehensive experiments in multiple domains, including particle simulations, human motion capture, and molecular dynamics, demonstrate the significantly superior performance of EGNO against existing methods, thanks to the equivariant temporal modeling. Our code is available at https://github.com/MinkaiXu/egno.

Minkai Xu, Jiaqi Han, Aaron Lou, Jean Kossaifi, Arvind Ramanathan, Kamyar Azizzadenesheli, Jure Leskovec, Stefano Ermon, Anima Anandkumar• 2024

Related benchmarks

TaskDatasetResultRank
Force PredictionMD17 (test)
Aspirin Force Error9.44
39
Deformable object simulationBOB (test)
RMSE0.299
12
Deformable object simulationSPOT (test)
RMSE0.37
12
Deformable object simulationCUBE (test)
RMSE0.503
12
Deformable object simulationCUBEXL (test)
RMSE0.662
12
S2S (T=1) 3D Joint Trajectory PredictionCMU Motion Capture Walk, Subject #35 Graphics Lab 2003 (test)
F-MSE14.2
9
S2S (T=1) 3D Joint Trajectory PredictionCMU Motion Capture Run, Subject #9 2003 (test)
F-MSE4.15
9
State-to-State (S2S) PredictionMD17
S2S Prediction Error (Aspirin)9.64
9
State-to-state predictionMD17 (test)
RMSD (Aspirin)0.0307
9
State-to-trajectory predictionMD17 (test)
Aspirin Error3.06
8
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