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Automatic Posterior Transformation for Likelihood-Free Inference

About

How can one perform Bayesian inference on stochastic simulators with intractable likelihoods? A recent approach is to learn the posterior from adaptively proposed simulations using neural network-based conditional density estimators. However, existing methods are limited to a narrow range of proposal distributions or require importance weighting that can limit performance in practice. Here we present automatic posterior transformation (APT), a new sequential neural posterior estimation method for simulation-based inference. APT can modify the posterior estimate using arbitrary, dynamically updated proposals, and is compatible with powerful flow-based density estimators. It is more flexible, scalable and efficient than previous simulation-based inference techniques. APT can operate directly on high-dimensional time series and image data, opening up new applications for likelihood-free inference.

David S. Greenberg, Marcel Nonnenmacher, Jakob H. Macke• 2019

Related benchmarks

TaskDatasetResultRank
Continuous Ranked Probability Score (CRPS) EstimationLorenz-96 200 samples (test)
CRPS Component F0.593
11
Parameter EstimationMultiscale Lorenz-96 (test)
Mean AP Error (F)11.29
11
Posterior EstimationSBIBM SLCP
Joint C2ST90
10
Posterior EstimationSBIBM Lotka–Volterra
Joint C2ST1
9
Posterior EstimationSBIBM Two Moons
Joint C2ST61
9
Posterior EstimationSBIBM Gaussian Mixture
Joint C2ST66
9
Posterior EstimationSBIBM SIR
Joint C2ST68
9
Posterior EstimationSBIBM Gaussian Linear
Joint C2ST0.55
8
Posterior EstimationSBIBM Bernoulli GLM
Joint C2ST68
6
Simulation-Based InferenceSBIBM
Two Moons Performance54
6
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