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Gradient-Based Neural DAG Learning

About

We propose a novel score-based approach to learning a directed acyclic graph (DAG) from observational data. We adapt a recently proposed continuous constrained optimization formulation to allow for nonlinear relationships between variables using neural networks. This extension allows to model complex interactions while avoiding the combinatorial nature of the problem. In addition to comparing our method to existing continuous optimization methods, we provide missing empirical comparisons to nonlinear greedy search methods. On both synthetic and real-world data sets, this new method outperforms current continuous methods on most tasks, while being competitive with existing greedy search methods on important metrics for causal inference.

S\'ebastien Lachapelle, Philippe Brouillard, Tristan Deleu, Simon Lacoste-Julien• 2019

Related benchmarks

TaskDatasetResultRank
DAG Structure Recoverynon-linear-1 5000 samples
SHD4
48
Causal DiscoverySachs real-world data protein signaling network
SHD13.2
26
Causal Structure LearningSachs
SHD15
20
Causal DiscoveryER5 (n=30, h=5)
FDR0.67
18
Causal DiscoverySF5 (n=30, h=5)
FDR72
18
Causal DiscoverySynthetic SF3 n=50, h=3 (test)
FDR34
17
Causal DiscoverySynthetic ER3 n=50, h=3 (test)
FDR74
17
Causal DiscoveryER3 (n=100, h=3) Synthetic (test)
FDR90
15
Causal DiscoverySF3 n=100, h=3 synthetic (test)
FDR83
15
Causal Structure LearningErdős–Rényi (ER) (n=100, h=5) synthetic (test)
FDR0.92
15
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