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UNet 3+: A Full-Scale Connected UNet for Medical Image Segmentation

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Recently, a growing interest has been seen in deep learning-based semantic segmentation. UNet, which is one of deep learning networks with an encoder-decoder architecture, is widely used in medical image segmentation. Combining multi-scale features is one of important factors for accurate segmentation. UNet++ was developed as a modified Unet by designing an architecture with nested and dense skip connections. However, it does not explore sufficient information from full scales and there is still a large room for improvement. In this paper, we propose a novel UNet 3+, which takes advantage of full-scale skip connections and deep supervisions. The full-scale skip connections incorporate low-level details with high-level semantics from feature maps in different scales; while the deep supervision learns hierarchical representations from the full-scale aggregated feature maps. The proposed method is especially benefiting for organs that appear at varying scales. In addition to accuracy improvements, the proposed UNet 3+ can reduce the network parameters to improve the computation efficiency. We further propose a hybrid loss function and devise a classification-guided module to enhance the organ boundary and reduce the over-segmentation in a non-organ image, yielding more accurate segmentation results. The effectiveness of the proposed method is demonstrated on two datasets. The code is available at: github.com/ZJUGiveLab/UNet-Version

Huimin Huang, Lanfen Lin, Ruofeng Tong, Hongjie Hu, Qiaowei Zhang, Yutaro Iwamoto, Xianhua Han, Yen-Wei Chen, Jian Wu• 2020

Related benchmarks

TaskDatasetResultRank
Retinal Vessel SegmentationCHASE DB1
Sensitivity (SE)85.74
47
Retinal Vessel SegmentationSTARE
F1 Score84.829
40
Semantic segmentationCSDD original (test)
F1 Score (w/bg)72.12
34
Semantic segmentationCSDD (test)
F1 Score (w/bg)78.5
34
Medical Image SegmentationSpleen Task-5
Dice Score0.8274
27
Medical Image SegmentationHeart Task-1
Dice Score87.52
26
Medical Image SegmentationProstate Task-3--
18
Semantic segmentationCSDD without data preprocessing original (test)
F1 Score (w/bg)72.1
17
Semantic segmentationDataset original (test)
F1 Score (w/bg)72.12
17
Semantic segmentationDataset described in Section 4.5 100% 1.0 (train)
F1 Score (w/bg)78.5
17
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