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Disentangled Representations for Domain-generalized Cardiac Segmentation

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Robust cardiac image segmentation is still an open challenge due to the inability of the existing methods to achieve satisfactory performance on unseen data of different domains. Since the acquisition and annotation of medical data are costly and time-consuming, recent work focuses on domain adaptation and generalization to bridge the gap between data from different populations and scanners. In this paper, we propose two data augmentation methods that focus on improving the domain adaptation and generalization abilities of state-to-the-art cardiac segmentation models. In particular, our "Resolution Augmentation" method generates more diverse data by rescaling images to different resolutions within a range spanning different scanner protocols. Subsequently, our "Factor-based Augmentation" method generates more diverse data by projecting the original samples onto disentangled latent spaces, and combining the learned anatomy and modality factors from different domains. Our extensive experiments demonstrate the importance of efficient adaptation between seen and unseen domains, as well as model generalization ability, to robust cardiac image segmentation.

Xiao Liu, Spyridon Thermos, Agisilaos Chartsias, Alison O'Neil, Sotirios A. Tsaftaris• 2020

Related benchmarks

TaskDatasetResultRank
Cardiac Image SegmentationM&Ms Target A 1.0
Dice (%)81.5
15
Cardiac Image SegmentationM&Ms Target C 1.0
Dice Score0.8564
15
Cardiac Image SegmentationM&Ms (Target C)
Hausdorff Distance13.67
15
Cardiac Image SegmentationM&Ms Target B 1.0
Dice Score85.04
15
Cardiac Image SegmentationM&Ms Target D 1.0
Dice Score84.96
15
Spinal Cord Gray Matter SegmentationSCGM (test)
Target 1 Score90.25
10
Spinal Cord Gray Matter SegmentationSCGM Site 1
Hausdorff Distance1.37
10
Cardiac Image SegmentationM&Ms Target A v1
Hausdorff Distance22.84
10
Cardiac Image SegmentationM&Ms Target D
Hausdorff Distance15.15
10
Spinal Cord Gray Matter SegmentationSCGM Average
Hausdorff Distance1.93
10
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