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Weisfeiler and Lehman Go Topological: Message Passing Simplicial Networks

About

The pairwise interaction paradigm of graph machine learning has predominantly governed the modelling of relational systems. However, graphs alone cannot capture the multi-level interactions present in many complex systems and the expressive power of such schemes was proven to be limited. To overcome these limitations, we propose Message Passing Simplicial Networks (MPSNs), a class of models that perform message passing on simplicial complexes (SCs). To theoretically analyse the expressivity of our model we introduce a Simplicial Weisfeiler-Lehman (SWL) colouring procedure for distinguishing non-isomorphic SCs. We relate the power of SWL to the problem of distinguishing non-isomorphic graphs and show that SWL and MPSNs are strictly more powerful than the WL test and not less powerful than the 3-WL test. We deepen the analysis by comparing our model with traditional graph neural networks (GNNs) with ReLU activations in terms of the number of linear regions of the functions they can represent. We empirically support our theoretical claims by showing that MPSNs can distinguish challenging strongly regular graphs for which GNNs fail and, when equipped with orientation equivariant layers, they can improve classification accuracy in oriented SCs compared to a GNN baseline.

Cristian Bodnar, Fabrizio Frasca, Yu Guang Wang, Nina Otter, Guido Mont\'ufar, Pietro Li\`o, Michael Bronstein• 2021

Related benchmarks

TaskDatasetResultRank
Graph ClassificationPROTEINS
Accuracy77
994
Node ClassificationCiteseer
Accuracy94.14
931
Graph ClassificationMUTAG
Accuracy92.7
862
Graph ClassificationNCI1
Accuracy83.6
501
Node ClassificationCora-ML
Accuracy86.58
232
Graph ClassificationNCI109
Accuracy84
223
Graph ClassificationMUTAG (10-fold cross-validation)
Accuracy89.8
219
Graph ClassificationPROTEINS (10-fold cross-validation)
Accuracy76.7
214
Node ClassificationRoman-Empire
Accuracy88.76
206
Graph RegressionZINC (test)
MAE0.079
204
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