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Lesion-based Contrastive Learning for Diabetic Retinopathy Grading from Fundus Images

About

Manually annotating medical images is extremely expensive, especially for large-scale datasets. Self-supervised contrastive learning has been explored to learn feature representations from unlabeled images. However, unlike natural images, the application of contrastive learning to medical images is relatively limited. In this work, we propose a self-supervised framework, namely lesion-based contrastive learning for automated diabetic retinopathy (DR) grading. Instead of taking entire images as the input in the common contrastive learning scheme, lesion patches are employed to encourage the feature extractor to learn representations that are highly discriminative for DR grading. We also investigate different data augmentation operations in defining our contrastive prediction task. Extensive experiments are conducted on the publicly-accessible dataset EyePACS, demonstrating that our proposed framework performs outstandingly on DR grading in terms of both linear evaluation and transfer capacity evaluation.

Yijin Huang, Li Lin, Pujin Cheng, Junyan Lyu, Xiaoying Tang• 2021

Related benchmarks

TaskDatasetResultRank
DR GradingEyeQ
Kappa0.848
22
Multi-label chest disease diagnosisChest X-ray
Kappa0.636
22
Diabetic Retinopathy GradingEyePACS 1% (train)
Quadratic Weighted Kappa68.37
11
Diabetic Retinopathy GradingEyePACS 5% (train)
QW Kappa75.4
11
Diabetic Retinopathy GradingEyePACS 10% (train)
Quadratic Weighted Kappa77.49
11
Diabetic Retinopathy GradingEyePACS 25% (train)
Quadratic Weighted Kappa80.74
11
Diabetic Retinopathy GradingEyePACS 100% (train)
Quadratic Weighted Kappa83.22
11
DR GradingEyeQ (70%)
Kappa0.783
11
Multi-label chest disease diagnosisChest X-ray (70%)
Kappa61.7
11
DR GradingIDRiD (10-fold cross-val)
AUC88.13
10
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