Lesion-based Contrastive Learning for Diabetic Retinopathy Grading from Fundus Images
About
Manually annotating medical images is extremely expensive, especially for large-scale datasets. Self-supervised contrastive learning has been explored to learn feature representations from unlabeled images. However, unlike natural images, the application of contrastive learning to medical images is relatively limited. In this work, we propose a self-supervised framework, namely lesion-based contrastive learning for automated diabetic retinopathy (DR) grading. Instead of taking entire images as the input in the common contrastive learning scheme, lesion patches are employed to encourage the feature extractor to learn representations that are highly discriminative for DR grading. We also investigate different data augmentation operations in defining our contrastive prediction task. Extensive experiments are conducted on the publicly-accessible dataset EyePACS, demonstrating that our proposed framework performs outstandingly on DR grading in terms of both linear evaluation and transfer capacity evaluation.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| DR Grading | EyeQ | Kappa0.848 | 22 | |
| Multi-label chest disease diagnosis | Chest X-ray | Kappa0.636 | 22 | |
| Diabetic Retinopathy Grading | EyePACS 1% (train) | Quadratic Weighted Kappa68.37 | 11 | |
| Diabetic Retinopathy Grading | EyePACS 5% (train) | QW Kappa75.4 | 11 | |
| Diabetic Retinopathy Grading | EyePACS 10% (train) | Quadratic Weighted Kappa77.49 | 11 | |
| Diabetic Retinopathy Grading | EyePACS 25% (train) | Quadratic Weighted Kappa80.74 | 11 | |
| Diabetic Retinopathy Grading | EyePACS 100% (train) | Quadratic Weighted Kappa83.22 | 11 | |
| DR Grading | EyeQ (70%) | Kappa0.783 | 11 | |
| Multi-label chest disease diagnosis | Chest X-ray (70%) | Kappa61.7 | 11 | |
| DR Grading | IDRiD (10-fold cross-val) | AUC88.13 | 10 |