E(n) Equivariant Graph Neural Networks
About
This paper introduces a new model to learn graph neural networks equivariant to rotations, translations, reflections and permutations called E(n)-Equivariant Graph Neural Networks (EGNNs). In contrast with existing methods, our work does not require computationally expensive higher-order representations in intermediate layers while it still achieves competitive or better performance. In addition, whereas existing methods are limited to equivariance on 3 dimensional spaces, our model is easily scaled to higher-dimensional spaces. We demonstrate the effectiveness of our method on dynamical systems modelling, representation learning in graph autoencoders and predicting molecular properties.
Victor Garcia Satorras, Emiel Hoogeboom, Max Welling• 2021
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Molecular property prediction | QM9 (test) | mu29 | 174 | |
| Molecular property prediction | QM9 | Cv0.031 | 70 | |
| Dynamic Scene Rendering | MPM Dynamic Scenes 1.0 (test) | PSNR30.28 | 25 | |
| Atomic force prediction | MD17 (test) | -- | 22 | |
| Molecular property prediction | QM9 2014 (test) | Dipole Moment (mu)0.029 | 20 | |
| Molecular Generation | QM9 (test) | -- | 17 | |
| Antibody Generation | Paired OAS (test) | W1 (Natural)0.3988 | 16 | |
| Antibody Binder Generation | Trastuzumab CDR H3 mutant dataset (test) | W1 (Natural)0.0013 | 13 | |
| Aptamer Screening | GFP | Top-10 Precision0.3 | 12 | |
| Property Prediction | QM9 random (test) | alpha (bohr^3)0.071 | 11 |
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