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Node Feature Extraction by Self-Supervised Multi-scale Neighborhood Prediction

About

Learning on graphs has attracted significant attention in the learning community due to numerous real-world applications. In particular, graph neural networks (GNNs), which take numerical node features and graph structure as inputs, have been shown to achieve state-of-the-art performance on various graph-related learning tasks. Recent works exploring the correlation between numerical node features and graph structure via self-supervised learning have paved the way for further performance improvements of GNNs. However, methods used for extracting numerical node features from raw data are still graph-agnostic within standard GNN pipelines. This practice is sub-optimal as it prevents one from fully utilizing potential correlations between graph topology and node attributes. To mitigate this issue, we propose a new self-supervised learning framework, Graph Information Aided Node feature exTraction (GIANT). GIANT makes use of the eXtreme Multi-label Classification (XMC) formalism, which is crucial for fine-tuning the language model based on graph information, and scales to large datasets. We also provide a theoretical analysis that justifies the use of XMC over link prediction and motivates integrating XR-Transformers, a powerful method for solving XMC problems, into the GIANT framework. We demonstrate the superior performance of GIANT over the standard GNN pipeline on Open Graph Benchmark datasets: For example, we improve the accuracy of the top-ranked method GAMLP from $68.25\%$ to $69.67\%$, SGC from $63.29\%$ to $66.10\%$ and MLP from $47.24\%$ to $61.10\%$ on the ogbn-papers100M dataset by leveraging GIANT.

Eli Chien, Wei-Cheng Chang, Cho-Jui Hsieh, Hsiang-Fu Yu, Jiong Zhang, Olgica Milenkovic, Inderjit S Dhillon• 2021

Related benchmarks

TaskDatasetResultRank
Node ClassificationCora (test)
Mean Accuracy75.13
687
Link PredictionFB15k-237 (test)--
419
Node Classificationogbn-arxiv (test)
Accuracy76.15
382
Link PredictionWN18RR (test)--
380
Node Classificationogbn-arxiv v1 (test)
Accuracy75.93
52
Node Classificationogbn-products v1 (test)
Accuracy80.49
28
Node Classificationogbn-papers100M
Accuracy69.67
24
Node Classificationogbn-products official (test)
Average Accuracy85.47
20
Node ClassificationPubMed (test)
Accuracy72.31
20
Node ClassificationWiki-CS (test)
Accuracy76.56
18
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