Node Feature Extraction by Self-Supervised Multi-scale Neighborhood Prediction
About
Learning on graphs has attracted significant attention in the learning community due to numerous real-world applications. In particular, graph neural networks (GNNs), which take numerical node features and graph structure as inputs, have been shown to achieve state-of-the-art performance on various graph-related learning tasks. Recent works exploring the correlation between numerical node features and graph structure via self-supervised learning have paved the way for further performance improvements of GNNs. However, methods used for extracting numerical node features from raw data are still graph-agnostic within standard GNN pipelines. This practice is sub-optimal as it prevents one from fully utilizing potential correlations between graph topology and node attributes. To mitigate this issue, we propose a new self-supervised learning framework, Graph Information Aided Node feature exTraction (GIANT). GIANT makes use of the eXtreme Multi-label Classification (XMC) formalism, which is crucial for fine-tuning the language model based on graph information, and scales to large datasets. We also provide a theoretical analysis that justifies the use of XMC over link prediction and motivates integrating XR-Transformers, a powerful method for solving XMC problems, into the GIANT framework. We demonstrate the superior performance of GIANT over the standard GNN pipeline on Open Graph Benchmark datasets: For example, we improve the accuracy of the top-ranked method GAMLP from $68.25\%$ to $69.67\%$, SGC from $63.29\%$ to $66.10\%$ and MLP from $47.24\%$ to $61.10\%$ on the ogbn-papers100M dataset by leveraging GIANT.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Node Classification | Cora (test) | Mean Accuracy75.13 | 687 | |
| Link Prediction | FB15k-237 (test) | -- | 419 | |
| Node Classification | ogbn-arxiv (test) | Accuracy76.15 | 382 | |
| Link Prediction | WN18RR (test) | -- | 380 | |
| Node Classification | ogbn-arxiv v1 (test) | Accuracy75.93 | 52 | |
| Node Classification | ogbn-products v1 (test) | Accuracy80.49 | 28 | |
| Node Classification | ogbn-papers100M | Accuracy69.67 | 24 | |
| Node Classification | ogbn-products official (test) | Average Accuracy85.47 | 20 | |
| Node Classification | PubMed (test) | Accuracy72.31 | 20 | |
| Node Classification | Wiki-CS (test) | Accuracy76.56 | 18 |