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TriMap: Large-scale Dimensionality Reduction Using Triplets

About

We introduce "TriMap"; a dimensionality reduction technique based on triplet constraints, which preserves the global structure of the data better than the other commonly used methods such as t-SNE, LargeVis, and UMAP. To quantify the global accuracy of the embedding, we introduce a score that roughly reflects the relative placement of the clusters rather than the individual points. We empirically show the excellent performance of TriMap on a large variety of datasets in terms of the quality of the embedding as well as the runtime. On our performance benchmarks, TriMap easily scales to millions of points without depleting the memory and clearly outperforms t-SNE, LargeVis, and UMAP in terms of runtime.

Ehsan Amid, Manfred K. Warmuth• 2019

Related benchmarks

TaskDatasetResultRank
Dimensionality ReductionPacker (Pac)
Aggregated Local-Global Score0.51
11
Dimensionality ReductionTasic (Tas)
Aggregated Local-Global Score66
11
Dimensionality ReductionMacosko (Mac)
Aggregated Local-Global Score55
11
Dimensionality ReductionSatellite (Sat)
Aggregated Local-Global Score58
11
Dimensionality ReductionKanduri (Kan)
Aggregated local-global score56
11
Dimensionality ReductionWagner (Wag)
Aggregated Local-Global Score0.58
11
Dimensionality Reduction1000 Genomes (1kG)
Aggregated local-global Score55
11
Dimensionality ReductionMammoth (Mam)
Aggregated Local-Global Score68
11
Dimensionality ReductionCIFAR-10
Aggregated Local-Global Score0.25
11
Dimensionality ReductionFashion-MNIST (FMN)
Aggregated Local-Global Score24
11
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