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Differentiable Zooming for Multiple Instance Learning on Whole-Slide Images

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Multiple Instance Learning (MIL) methods have become increasingly popular for classifying giga-pixel sized Whole-Slide Images (WSIs) in digital pathology. Most MIL methods operate at a single WSI magnification, by processing all the tissue patches. Such a formulation induces high computational requirements, and constrains the contextualization of the WSI-level representation to a single scale. A few MIL methods extend to multiple scales, but are computationally more demanding. In this paper, inspired by the pathological diagnostic process, we propose ZoomMIL, a method that learns to perform multi-level zooming in an end-to-end manner. ZoomMIL builds WSI representations by aggregating tissue-context information from multiple magnifications. The proposed method outperforms the state-of-the-art MIL methods in WSI classification on two large datasets, while significantly reducing the computational demands with regard to Floating-Point Operations (FLOPs) and processing time by up to 40x.

Kevin Thandiackal, Boqi Chen, Pushpak Pati, Guillaume Jaume, Drew F. K. Williamson, Maria Gabrani, Orcun Goksel• 2022

Related benchmarks

TaskDatasetResultRank
Survival PredictionTCGA-LUAD--
213
Cancer ClassificationTCGA-BRCA
Accuracy88.6
94
Survival PredictionBLCA
C-Index0.57
80
Survival PredictionBRCA
C-Index0.563
80
Slide-level classificationCamelyon16
AUC0.973
78
Survival PredictionLUAD
C-index0.568
64
Survival PredictionTCGA-COAD
C-index0.642
43
Cancer SubtypingBRACS-7
AUC0.86
40
Survival PredictionGBMLGG
C-index0.77
34
Whole Slide Image classificationCAMELYON 17
F1 Score30.9
34
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