Differentiable Zooming for Multiple Instance Learning on Whole-Slide Images
About
Multiple Instance Learning (MIL) methods have become increasingly popular for classifying giga-pixel sized Whole-Slide Images (WSIs) in digital pathology. Most MIL methods operate at a single WSI magnification, by processing all the tissue patches. Such a formulation induces high computational requirements, and constrains the contextualization of the WSI-level representation to a single scale. A few MIL methods extend to multiple scales, but are computationally more demanding. In this paper, inspired by the pathological diagnostic process, we propose ZoomMIL, a method that learns to perform multi-level zooming in an end-to-end manner. ZoomMIL builds WSI representations by aggregating tissue-context information from multiple magnifications. The proposed method outperforms the state-of-the-art MIL methods in WSI classification on two large datasets, while significantly reducing the computational demands with regard to Floating-Point Operations (FLOPs) and processing time by up to 40x.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Survival Prediction | TCGA-LUAD | -- | 213 | |
| Cancer Classification | TCGA-BRCA | Accuracy88.6 | 94 | |
| Survival Prediction | BLCA | C-Index0.57 | 80 | |
| Survival Prediction | BRCA | C-Index0.563 | 80 | |
| Slide-level classification | Camelyon16 | AUC0.973 | 78 | |
| Survival Prediction | LUAD | C-index0.568 | 64 | |
| Survival Prediction | TCGA-COAD | C-index0.642 | 43 | |
| Cancer Subtyping | BRACS-7 | AUC0.86 | 40 | |
| Survival Prediction | GBMLGG | C-index0.77 | 34 | |
| Whole Slide Image classification | CAMELYON 17 | F1 Score30.9 | 34 |