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Hierarchical Graph Transformer with Adaptive Node Sampling

About

The Transformer architecture has achieved remarkable success in a number of domains including natural language processing and computer vision. However, when it comes to graph-structured data, transformers have not achieved competitive performance, especially on large graphs. In this paper, we identify the main deficiencies of current graph transformers:(1) Existing node sampling strategies in Graph Transformers are agnostic to the graph characteristics and the training process. (2) Most sampling strategies only focus on local neighbors and neglect the long-range dependencies in the graph. We conduct experimental investigations on synthetic datasets to show that existing sampling strategies are sub-optimal. To tackle the aforementioned problems, we formulate the optimization strategies of node sampling in Graph Transformer as an adversary bandit problem, where the rewards are related to the attention weights and can vary in the training procedure. Meanwhile, we propose a hierarchical attention scheme with graph coarsening to capture the long-range interactions while reducing computational complexity. Finally, we conduct extensive experiments on real-world datasets to demonstrate the superiority of our method over existing graph transformers and popular GNNs.

Zaixi Zhang, Qi Liu, Qingyong Hu, Chee-Kong Lee• 2022

Related benchmarks

TaskDatasetResultRank
Node ClassificationCora
Accuracy88
1225
Node ClassificationCiteseer
Accuracy75
1037
Node ClassificationCiteseer (test)
Accuracy0.8013
1013
Node ClassificationCora (test)
Mean Accuracy88.69
951
Node ClassificationChameleon
Accuracy54.6
936
Node ClassificationCornell
Accuracy59.8
900
Node ClassificationWisconsin
Accuracy85.2
898
Node ClassificationTexas
Accuracy0.638
859
Node ClassificationSquirrel
Accuracy40.9
815
Node ClassificationPubMed (test)
Accuracy89.75
628
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