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OCTAve: 2D en face Optical Coherence Tomography Angiography Vessel Segmentation in Weakly-Supervised Learning with Locality Augmentation

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While there have been increased researches using deep learning techniques for the extraction of vascular structure from the 2D en face OCTA, for such approach, it is known that the data annotation process on the curvilinear structure like the retinal vasculature is very costly and time consuming, albeit few tried to address the annotation problem. In this work, we propose the application of the scribble-base weakly-supervised learning method to automate the pixel-level annotation. The proposed method, called OCTAve, combines the weakly-supervised learning using scribble-annotated ground truth augmented with an adversarial and a novel self-supervised deep supervision. Our novel mechanism is designed to utilize the discriminative outputs from the discrimination layer of a UNet-like architecture where the Kullback-Liebler Divergence between the aggregate discriminative outputs and the segmentation map predicate is minimized during the training. This combined method leads to the better localization of the vascular structure as shown in our experiments. We validate our proposed method on the large public datasets i.e., ROSE, OCTA-500. The segmentation performance is compared against both state-of-the-art fully-supervised and scribble-based weakly-supervised approaches. The implementation of our work used in the experiments is located at [LINK].

Amrest Chinkamol, Vetit Kanjaras, Phattarapong Sawangjai, Yitian Zhao, Thapanun Sudhawiyangkul, Chantana Chantrapornchai, Cuntai Guan, Theerawit Wilaiprasitporn• 2022

Related benchmarks

TaskDatasetResultRank
Vessel segmentationOCTA 3M FULL projection 500 (test)
Dice Coefficient78.48
18
Vessel segmentationOCTA-500 3M ILM-OPL projection
Dice Coefficient82.35
18
Vessel segmentationOCTA-500 3M OPL-BM projection
Dice Coefficient73.86
18
Vessel segmentationOCTA-500 6M FULL projection
Dice Coefficient77.17
18
Vessel segmentationOCTA-500 6M (ILM-OPL projection)
Dice Coefficient81.43
18
Vessel segmentationOCTA-500 6M OPL-BM projection
Dice Coefficient72.16
18
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