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Cross-Modal Translation and Alignment for Survival Analysis

About

With the rapid advances in high-throughput sequencing technologies, the focus of survival analysis has shifted from examining clinical indicators to incorporating genomic profiles with pathological images. However, existing methods either directly adopt a straightforward fusion of pathological features and genomic profiles for survival prediction, or take genomic profiles as guidance to integrate the features of pathological images. The former would overlook intrinsic cross-modal correlations. The latter would discard pathological information irrelevant to gene expression. To address these issues, we present a Cross-Modal Translation and Alignment (CMTA) framework to explore the intrinsic cross-modal correlations and transfer potential complementary information. Specifically, we construct two parallel encoder-decoder structures for multi-modal data to integrate intra-modal information and generate cross-modal representation. Taking the generated cross-modal representation to enhance and recalibrate intra-modal representation can significantly improve its discrimination for comprehensive survival analysis. To explore the intrinsic crossmodal correlations, we further design a cross-modal attention module as the information bridge between different modalities to perform cross-modal interactions and transfer complementary information. Our extensive experiments on five public TCGA datasets demonstrate that our proposed framework outperforms the state-of-the-art methods.

Fengtao Zhou, Hao Chen• 2023

Related benchmarks

TaskDatasetResultRank
Survival PredictionTCGA-LUAD
C-index0.675
195
Survival PredictionTCGA-UCEC
C-index0.7347
179
Survival PredictionTCGA-BLCA
C-index0.693
116
Survival PredictionTCGA-BRCA
C-index0.681
115
Survival PredictionTCGA-STAD
C-index0.584
89
Survival PredictionTCGA-COADREAD
C-index67.8
82
Survival PredictionTCGA-BRCA (test)
Concordance Index (CI)0.652
67
Survival PredictionBLCA
C-Index0.7113
66
Survival PredictionBRCA
C-Index0.7073
66
Survival PredictionTCGA-KIRC (5-fold CV)
C-Index0.7456
56
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