Cross-Modal Translation and Alignment for Survival Analysis
About
With the rapid advances in high-throughput sequencing technologies, the focus of survival analysis has shifted from examining clinical indicators to incorporating genomic profiles with pathological images. However, existing methods either directly adopt a straightforward fusion of pathological features and genomic profiles for survival prediction, or take genomic profiles as guidance to integrate the features of pathological images. The former would overlook intrinsic cross-modal correlations. The latter would discard pathological information irrelevant to gene expression. To address these issues, we present a Cross-Modal Translation and Alignment (CMTA) framework to explore the intrinsic cross-modal correlations and transfer potential complementary information. Specifically, we construct two parallel encoder-decoder structures for multi-modal data to integrate intra-modal information and generate cross-modal representation. Taking the generated cross-modal representation to enhance and recalibrate intra-modal representation can significantly improve its discrimination for comprehensive survival analysis. To explore the intrinsic crossmodal correlations, we further design a cross-modal attention module as the information bridge between different modalities to perform cross-modal interactions and transfer complementary information. Our extensive experiments on five public TCGA datasets demonstrate that our proposed framework outperforms the state-of-the-art methods.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Survival Prediction | TCGA-LUAD | C-index0.675 | 116 | |
| Survival Prediction | TCGA-UCEC | C-index0.705 | 74 | |
| Survival Prediction | TCGA-COADREAD | C-index67.8 | 67 | |
| Survival Prediction | TCGA-BRCA | C-index0.667 | 60 | |
| Survival Prediction | TCGA-BRCA (5-fold cross-validation) | C-Index0.7132 | 54 | |
| Survival Prediction | TCGA-STAD | C-index0.584 | 52 | |
| Survival Prediction | TCGA-KIRC (5-fold CV) | C-Index0.7456 | 46 | |
| Survival Prediction | TCGA-LUAD (5-fold CV) | C-Index0.6456 | 46 | |
| Survival Prediction | TCGA-BLCA | C-index0.66 | 45 | |
| Survival Prediction | TCGA-STAD (5-fold cross-validation) | C-Index0.592 | 44 |