Stable Deep MRI Reconstruction using Generative Priors
About
Data-driven approaches recently achieved remarkable success in magnetic resonance imaging (MRI) reconstruction, but integration into clinical routine remains challenging due to a lack of generalizability and interpretability. In this paper, we address these challenges in a unified framework based on generative image priors. We propose a novel deep neural network based regularizer which is trained in a generative setting on reference magnitude images only. After training, the regularizer encodes higher-level domain statistics which we demonstrate by synthesizing images without data. Embedding the trained model in a classical variational approach yields high-quality reconstructions irrespective of the sub-sampling pattern. In addition, the model shows stable behavior when confronted with out-of-distribution data in the form of contrast variation. Furthermore, a probabilistic interpretation provides a distribution of reconstructions and hence allows uncertainty quantification. To reconstruct parallel MRI, we propose a fast algorithm to jointly estimate the image and the sensitivity maps. The results demonstrate competitive performance, on par with state-of-the-art end-to-end deep learning methods, while preserving the flexibility with respect to sub-sampling patterns and allowing for uncertainty quantification.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Parallel Imaging Reconstruction | CORPDFS | PSNR32.07 | 35 | |
| PI reconstruction | Anatomical T1 contrast out-of-distribution | PSNR36.63 | 35 | |
| Parallel Imaging Reconstruction | knee dataset CORPD-weighted in-distribution (test) | PSNR34.35 | 35 | |
| Fluid Segmentation | RETOUCH Topcon → Spectralis | IRF DICE46.4 | 13 | |
| Fluid Segmentation | RETOUCH Cirrus → Spectralis 2019 (test) | IRF42.9 | 13 | |
| Parallel Imaging Reconstruction | Anatomical out-of-distribution dataset T2 contrast, Cartesian trajectory, A=8, ACL=8 | PSNR32.61 | 7 | |
| Parallel Imaging Reconstruction | Anatomical out-of-distribution dataset T2 contrast, Cartesian trajectory, Rotated phase-encoding, A=8, ACL=8 | PSNR35.01 | 7 | |
| Parallel Imaging Reconstruction | Anatomical out-of-distribution dataset T2 contrast, Cartesian trajectory, A=4, ACL=4 | PSNR32.15 | 7 | |
| Parallel Imaging Reconstruction | Anatomical out-of-distribution dataset T2 contrast, Radial trajectory, A=11 | PSNR33.42 | 7 | |
| Parallel Imaging Reconstruction | Anatomical out-of-distribution dataset T2 contrast, 2D Gaussian trajectory, A=8 | PSNR34.19 | 7 |