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Locality-Aware Graph-Rewiring in GNNs

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Graph Neural Networks (GNNs) are popular models for machine learning on graphs that typically follow the message-passing paradigm, whereby the feature of a node is updated recursively upon aggregating information over its neighbors. While exchanging messages over the input graph endows GNNs with a strong inductive bias, it can also make GNNs susceptible to over-squashing, thereby preventing them from capturing long-range interactions in the given graph. To rectify this issue, graph rewiring techniques have been proposed as a means of improving information flow by altering the graph connectivity. In this work, we identify three desiderata for graph-rewiring: (i) reduce over-squashing, (ii) respect the locality of the graph, and (iii) preserve the sparsity of the graph. We highlight fundamental trade-offs that occur between spatial and spectral rewiring techniques; while the former often satisfy (i) and (ii) but not (iii), the latter generally satisfy (i) and (iii) at the expense of (ii). We propose a novel rewiring framework that satisfies all of (i)--(iii) through a locality-aware sequence of rewiring operations. We then discuss a specific instance of such rewiring framework and validate its effectiveness on several real-world benchmarks, showing that it either matches or significantly outperforms existing rewiring approaches.

Federico Barbero, Ameya Velingker, Amin Saberi, Michael Bronstein, Francesco Di Giovanni• 2023

Related benchmarks

TaskDatasetResultRank
Graph ClassificationPROTEINS
Accuracy71.07
1383
Graph ClassificationMUTAG
Accuracy68
1229
Graph ClassificationCOLLAB
Accuracy71.32
532
Graph ClassificationIMDB-B
Accuracy67.3
455
Graph ClassificationIMDB-M
Accuracy45.4
434
Graph RegressionPeptides struct LRGB (test)
MAE0.2453
255
Graph ClassificationMutag (test)
Accuracy78.4
238
Graph ClassificationPROTEINS (test)
Accuracy75.11
227
Graph ClassificationPeptides-func LRGB (test)
AP0.6878
213
Graph ClassificationNCI1 (test)
Accuracy75.45
190
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