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AutoPET III Challenge: PET/CT Semantic Segmentation

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In this study, we implemented a two-stage deep learning-based approach to segment lesions in PET/CT images for the AutoPET III challenge. The first stage utilized a DynUNet model for coarse segmentation, identifying broad regions of interest. The second stage refined this segmentation using an ensemble of SwinUNETR, SegResNet, and UNet models. Preprocessing involved resampling images to a common resolution and normalization, while data augmentation techniques such as affine transformations and intensity adjustments were applied to enhance model generalization. The dataset was split into 80% training and 20% validation, excluding healthy cases. This method leverages multi-stage segmentation and model ensembling to achieve precise lesion segmentation, aiming to improve robustness and overall performance.

Reza Safdari, Mohammad Koohi-Moghaddam, Kyongtae Tyler Bae• 2024

Related benchmarks

TaskDatasetResultRank
Tumor SegmentationAutoPET Imu (test)
DSC60.26
16
Tumor SegmentationAutoPET UKT (test)
DSC0.6973
16
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