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Generative Adversarial Model-Based Optimization via Source Critic Regularization

About

Offline model-based optimization seeks to optimize against a learned surrogate model without querying the true oracle objective function during optimization. Such tasks are commonly encountered in protein design, robotics, and clinical medicine where evaluating the oracle function is prohibitively expensive. However, inaccurate surrogate model predictions are frequently encountered along offline optimization trajectories. To address this limitation, we propose generative adversarial model-based optimization using adaptive source critic regularization (aSCR) -- a task- and optimizer- agnostic framework for constraining the optimization trajectory to regions of the design space where the surrogate function is reliable. We propose a computationally tractable algorithm to dynamically adjust the strength of this constraint, and show how leveraging aSCR with standard Bayesian optimization outperforms existing methods on a suite of offline generative design tasks. Our code is available at https://github.com/michael-s-yao/gabo

Michael S. Yao, Yimeng Zeng, Hamsa Bastani, Jacob Gardner, James C. Gee, Osbert Bastani• 2024

Related benchmarks

TaskDatasetResultRank
Offline Model-Based OptimizationD'Kitty
Oracle Score (90th Pctl)0.89
17
Offline Model-Based OptimizationTF Bind 8
90th Percentile Oracle Score54.6
17
Offline Model-Based OptimizationChEMBL
90th Percentile Oracle Score0.61
17
Offline Model-Based OptimizationGFP
90th Percentile Oracle Score3.56
17
Offline Model-Based OptimizationUTR
90th Percentile Oracle Score6.4
17
Offline Model-Based OptimizationLogP
90th Percentile Oracle Score16.7
16
Model-Based OptimizationDesign-Bench
LogP21.3
16
Model-Based OptimizationDesign-Bench 2022 (test)
TF-Bind-8 Score0.954
16
Offline Model-Based OptimizationBranin
90th Percentile Oracle Score-14.2
16
Offline Model-Based OptimizationWarfarin
90th Percentile Oracle Score24
15
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