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WDM: 3D Wavelet Diffusion Models for High-Resolution Medical Image Synthesis

About

Due to the three-dimensional nature of CT- or MR-scans, generative modeling of medical images is a particularly challenging task. Existing approaches mostly apply patch-wise, slice-wise, or cascaded generation techniques to fit the high-dimensional data into the limited GPU memory. However, these approaches may introduce artifacts and potentially restrict the model's applicability for certain downstream tasks. This work presents WDM, a wavelet-based medical image synthesis framework that applies a diffusion model on wavelet decomposed images. The presented approach is a simple yet effective way of scaling 3D diffusion models to high resolutions and can be trained on a single \SI{40}{\giga\byte} GPU. Experimental results on BraTS and LIDC-IDRI unconditional image generation at a resolution of $128 \times 128 \times 128$ demonstrate state-of-the-art image fidelity (FID) and sample diversity (MS-SSIM) scores compared to recent GANs, Diffusion Models, and Latent Diffusion Models. Our proposed method is the only one capable of generating high-quality images at a resolution of $256 \times 256 \times 256$, outperforming all comparing methods.

Paul Friedrich, Julia Wolleb, Florentin Bieder, Alicia Durrer, Philippe C. Cattin• 2024

Related benchmarks

TaskDatasetResultRank
3D Medical Image Synthesis3D MRI (test)
FID0.3073
36
3D Shape Generation3D Shape Generation Dataset (test)
log-WGAN ratio1.95
30
Medical Image SynthesisVoCo 10k (train/test)
FID0.9668
16
Brain Age PredictionBrain Age ≥ 44 (test)
Absolute Error6.36
15
Brain Age PredictionBrain Age Age ≥ 44 (train)
Absolute Error1.63
15
Brain Age Prediction3D Brain MRI Multi-site Cohort (test)
Brain Age Error (BAE)3.93
15
3D MRI SynthesisOpenBHB (held-out)
FID0.0045
14
3D MRI Synthesis3D Brain MRI Multi-site Cohort 95-region ROI average (test)
iMAE52.65
14
Region-Based Anatomical PlausibilityBrain MRIs 95 Regions of Interest (test)
iMAE47.52
11
Autoencoder ReconstructionBrainScape (test)
LPIPS0.00e+0
10
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