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Learning diffusion at lightspeed

About

Diffusion regulates numerous natural processes and the dynamics of many successful generative models. Existing models to learn the diffusion terms from observational data rely on complex bilevel optimization problems and model only the drift of the system. We propose a new simple model, JKOnet*, which bypasses the complexity of existing architectures while presenting significantly enhanced representational capabilities: JKOnet* recovers the potential, interaction, and internal energy components of the underlying diffusion process. JKOnet* minimizes a simple quadratic loss and outperforms other baselines in terms of sample efficiency, computational complexity, and accuracy. Additionally, JKOnet* provides a closed-form optimal solution for linearly parametrized functionals, and, when applied to predict the evolution of cellular processes from real-world data, it achieves state-of-the-art accuracy at a fraction of the computational cost of all existing methods. Our methodology is based on the interpretation of diffusion processes as energy-minimizing trajectories in the probability space via the so-called JKO scheme, which we study via its first-order optimality conditions.

Antonio Terpin, Nicolas Lanzetti, Martin Gadea, Florian D\"orfler• 2024

Related benchmarks

TaskDatasetResultRank
Single-cell trajectory inferenceEB (Embryoid Body) single-cell 5D (Full-data)
W1 Distance (t=1)0.69
14
Temporal interpolationEB single-cell dataset 5D (held-out t=1)
W21.15
10
Temporal interpolationEB single-cell dataset 5D (mean t=1 & t=3)
W2 Score1.84
10
Temporal interpolationEB single-cell dataset 5D (held-out t=3)
W22.53
10
Population dynamics inferenceVlasov-Poisson bump-on-tail instability (test)
Avg W2 Error0.0043
5
Population dynamics inferenceVlasov-Poisson two-stream instability (test)
Average W2 Error0.0077
5
Gradient flow dynamics marginal predictionGradient flow SDEs Paired (train)
Average W1 Distance0.085
4
Gradient flow dynamics marginal predictionGradient flow SDEs Paired
Average W1 Distance0.193
4
Population Dynamics ModelingBoids (train)
W13.084
4
Population Dynamics ModelingBoids (forecast)
W1 Error3.174
4
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