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Fast and Accurate Gigapixel Pathological Image Classification with Hierarchical Distillation Multi-Instance Learning

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Although multi-instance learning (MIL) has succeeded in pathological image classification, it faces the challenge of high inference costs due to processing numerous patches from gigapixel whole slide images (WSIs). To address this, we propose HDMIL, a hierarchical distillation multi-instance learning framework that achieves fast and accurate classification by eliminating irrelevant patches. HDMIL consists of two key components: the dynamic multi-instance network (DMIN) and the lightweight instance pre-screening network (LIPN). DMIN operates on high-resolution WSIs, while LIPN operates on the corresponding low-resolution counterparts. During training, DMIN are trained for WSI classification while generating attention-score-based masks that indicate irrelevant patches. These masks then guide the training of LIPN to predict the relevance of each low-resolution patch. During testing, LIPN first determines the useful regions within low-resolution WSIs, which indirectly enables us to eliminate irrelevant regions in high-resolution WSIs, thereby reducing inference time without causing performance degradation. In addition, we further design the first Chebyshev-polynomials-based Kolmogorov-Arnold classifier in computational pathology, which enhances the performance of HDMIL through learnable activation layers. Extensive experiments on three public datasets demonstrate that HDMIL outperforms previous state-of-the-art methods, e.g., achieving improvements of 3.13% in AUC while reducing inference time by 28.6% on the Camelyon16 dataset.

Jiuyang Dong, Junjun Jiang, Kui Jiang, Jiahan Li, Yongbing Zhang• 2025

Related benchmarks

TaskDatasetResultRank
Cancer SubtypingBRACS-7
AUC0.821
40
WSI subtypingCAMELYON-16
F1 Score95.8
24
WSI subtypingBRACS
F1 Score71.7
24
WSI subtypingCAMELYON 17
F1 Score57.1
24
Renal cell carcinoma stagingRCC-STAGING TCGA
AUC79.8
22
Breast cancer subtype classificationBRACS-3
AUC90.2
22
Gene Mutation PredictionMUT-SETD2 MUT-HET-RCC
AUC68.9
22
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