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Distilled Prompt Learning for Incomplete Multimodal Survival Prediction

About

The integration of multimodal data including pathology images and gene profiles is widely applied in precise survival prediction. Despite recent advances in multimodal survival models, collecting complete modalities for multimodal fusion still poses a significant challenge, hindering their application in clinical settings. Current approaches tackling incomplete modalities often fall short, as they typically compensate for only a limited part of the knowledge of missing modalities. To address this issue, we propose a Distilled Prompt Learning framework (DisPro) to utilize the strong robustness of Large Language Models (LLMs) to missing modalities, which employs two-stage prompting for compensation of comprehensive information for missing modalities. In the first stage, Unimodal Prompting (UniPro) distills the knowledge distribution of each modality, preparing for supplementing modality-specific knowledge of the missing modality in the subsequent stage. In the second stage, Multimodal Prompting (MultiPro) leverages available modalities as prompts for LLMs to infer the missing modality, which provides modality-common information. Simultaneously, the unimodal knowledge acquired in the first stage is injected into multimodal inference to compensate for the modality-specific knowledge of the missing modality. Extensive experiments covering various missing scenarios demonstrated the superiority of the proposed method. The code is available at https://github.com/Innse/DisPro.

Yingxue Xu, Fengtao Zhou, Chenyu Zhao, Yihui Wang, Can Yang, Hao Chen• 2025

Related benchmarks

TaskDatasetResultRank
Survival PredictionTCGA-LUAD
C-index0.6
213
Survival PredictionTCGA-STAD
C-index0.543
125
Survival PredictionTCGA-KIRC
TDC0.664
28
Survival PredictionKIRC 60% missing modality (test)
C-index0.755
15
Survival PredictionBRCA 60% missing modality (test)
C-index0.639
15
Survival PredictionSTAD 60% missing modality (test)
C-index0.53
15
Survival PredictionLUAD 60% missing modality (test)
C-index0.576
15
Survival PredictionTCGA-BRCA
C-index0.69
13
Multimodal Survival PredictionBLCA TCGA (test)
C-Index0.6745
12
Multimodal Survival PredictionBRCA TCGA (test)
C-Index0.7358
6
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