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Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalance

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Multimodal pathology-genomic analysis has become increasingly prominent in cancer survival prediction. However, existing studies mainly utilize multi-instance learning to aggregate patch-level features, neglecting the information loss of contextual and hierarchical details within pathology images. Furthermore, the disparity in data granularity and dimensionality between pathology and genomics leads to a significant modality imbalance. The high spatial resolution inherent in pathology data renders it a dominant role while overshadowing genomics in multimodal integration. In this paper, we propose a multimodal survival prediction framework that incorporates hypergraph learning to effectively capture both contextual and hierarchical details from pathology images. Moreover, it employs a modality rebalance mechanism and an interactive alignment fusion strategy to dynamically reweight the contributions of the two modalities, thereby mitigating the pathology-genomics imbalance. Quantitative and qualitative experiments are conducted on five TCGA datasets, demonstrating that our model outperforms advanced methods by over 3.4\% in C-Index performance.

Mingcheng Qu, Guang Yang, Donglin Di, Tonghua Su, Yue Gao, Yang Song, Lei Fan• 2025

Related benchmarks

TaskDatasetResultRank
Glioma GradingTCGA GBM-LGG (3-fold val)
AUC88.7
48
Survival PredictionTCGA GBM-LGG Internal (test)
C-Index76.42
37
Survival PredictionCPTAC External (test)
C-Index53.76
27
DiagnosisTCGA GBM-LGG and IvyGAP (3-fold val)
AUC95.11
26
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