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Aggregation Buffer: Revisiting DropEdge with a New Parameter Block

About

We revisit DropEdge, a data augmentation technique for GNNs which randomly removes edges to expose diverse graph structures during training. While being a promising approach to effectively reduce overfitting on specific connections in the graph, we observe that its potential performance gain in supervised learning tasks is significantly limited. To understand why, we provide a theoretical analysis showing that the limited performance of DropEdge comes from the fundamental limitation that exists in many GNN architectures. Based on this analysis, we propose Aggregation Buffer, a parameter block specifically designed to improve the robustness of GNNs by addressing the limitation of DropEdge. Our method is compatible with any GNN model, and shows consistent performance improvements on multiple datasets. Moreover, our method effectively addresses well-known problems such as degree bias or structural disparity as a unifying solution. Code and datasets are available at https://github.com/dooho00/agg-buffer.

Dooho Lee, Myeong Kong, Sagad Hamid, Cheonwoo Lee, Jaemin Yoo• 2025

Related benchmarks

TaskDatasetResultRank
Node ClassificationCiteseer
Accuracy79.41
1037
Node ClassificationCiteseer (test)
Accuracy0.7332
945
Node ClassificationChameleon (test)
Mean Accuracy40.96
335
Node ClassificationSquirrel (test)
Mean Accuracy42.39
301
Node ClassificationActor (test)
Mean Accuracy0.3056
286
Node ClassificationPubMed (test)
Accuracy87.56
162
Node ClassificationWiki-CS (test)
Accuracy80.75
146
Node ClassificationCora (test)
Accuracy84.84
122
Node ClassificationCoauthor-CS (test)
Accuracy93.54
120
Node ClassificationAmazon Photo (test)
Accuracy92.44
112
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