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Temperature-Annealed Boltzmann Generators

About

Efficient sampling of unnormalized probability densities such as the Boltzmann distribution of molecular systems is a longstanding challenge. Next to conventional approaches like molecular dynamics or Markov chain Monte Carlo, variational approaches, such as training normalizing flows with the reverse Kullback-Leibler divergence, have been introduced. However, such methods are prone to mode collapse and often do not learn to sample the full configurational space. Here, we present temperature-annealed Boltzmann generators (TA-BG) to address this challenge. First, we demonstrate that training a normalizing flow with the reverse Kullback-Leibler divergence at high temperatures is possible without mode collapse. Furthermore, we introduce a reweighting-based training objective to anneal the distribution to lower target temperatures. We apply this methodology to three molecular systems of increasing complexity and, compared to the baseline, achieve better results in almost all metrics while requiring up to three times fewer target energy evaluations. For the largest system, our approach is the only method that accurately resolves the metastable states of the system.

Henrik Schopmans, Pascal Friederich• 2025

Related benchmarks

TaskDatasetResultRank
Boltzmann distribution modelingELIL Tetrapeptide d=219 (test)
Target Evaluations8
5
Boltzmann distribution modelingAlanine Hexapeptide d=180 (test)
Target Evaluations4
5
Boltzmann distribution modelingAlanine Dipeptide d=60 (test)
Target Evaluations1
5
Boltzmann distribution modelingAlanine Tetrapeptide d=120 (test)
Evaluation Scale1
5
Boltzmann GenerationAlanine Dipeptide d = 60
NLL214.4
5
Molecular distribution matchingAlanine Dipeptide
Ram-T-W20.064
3
Molecular distribution matchingAlanine Hexa-peptide
Ram-T-W20.838
3
Molecular distribution matchingAlanine Tetra-peptide
Ram-T-W20.456
3
Molecular distribution matchingELIL Tetrapeptide
Ram-T-W20.586
3
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