Temperature-Annealed Boltzmann Generators
About
Efficient sampling of unnormalized probability densities such as the Boltzmann distribution of molecular systems is a longstanding challenge. Next to conventional approaches like molecular dynamics or Markov chain Monte Carlo, variational approaches, such as training normalizing flows with the reverse Kullback-Leibler divergence, have been introduced. However, such methods are prone to mode collapse and often do not learn to sample the full configurational space. Here, we present temperature-annealed Boltzmann generators (TA-BG) to address this challenge. First, we demonstrate that training a normalizing flow with the reverse Kullback-Leibler divergence at high temperatures is possible without mode collapse. Furthermore, we introduce a reweighting-based training objective to anneal the distribution to lower target temperatures. We apply this methodology to three molecular systems of increasing complexity and, compared to the baseline, achieve better results in almost all metrics while requiring up to three times fewer target energy evaluations. For the largest system, our approach is the only method that accurately resolves the metastable states of the system.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Boltzmann distribution modeling | ELIL Tetrapeptide d=219 (test) | Target Evaluations8 | 5 | |
| Boltzmann distribution modeling | Alanine Hexapeptide d=180 (test) | Target Evaluations4 | 5 | |
| Boltzmann distribution modeling | Alanine Dipeptide d=60 (test) | Target Evaluations1 | 5 | |
| Boltzmann distribution modeling | Alanine Tetrapeptide d=120 (test) | Evaluation Scale1 | 5 | |
| Boltzmann Generation | Alanine Dipeptide d = 60 | NLL214.4 | 5 | |
| Molecular distribution matching | Alanine Dipeptide | Ram-T-W20.064 | 3 | |
| Molecular distribution matching | Alanine Hexa-peptide | Ram-T-W20.838 | 3 | |
| Molecular distribution matching | Alanine Tetra-peptide | Ram-T-W20.456 | 3 | |
| Molecular distribution matching | ELIL Tetrapeptide | Ram-T-W20.586 | 3 |