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Disentangled and Interpretable Multimodal Attention Fusion for Cancer Survival Prediction

About

To improve the prediction of cancer survival using whole-slide images and transcriptomics data, it is crucial to capture both modality-shared and modality-specific information. However, multimodal frameworks often entangle these representations, limiting interpretability and potentially suppressing discriminative features. To address this, we propose Disentangled and Interpretable Multimodal Attention Fusion (DIMAF), a multimodal framework that separates the intra- and inter-modal interactions within an attention-based fusion mechanism to learn distinct modality-specific and modality-shared representations. We introduce a loss based on Distance Correlation to promote disentanglement between these representations and integrate Shapley additive explanations to assess their relative contributions to survival prediction. We evaluate DIMAF on four public cancer survival datasets, achieving a relative average improvement of 1.85% in performance and 23.7% in disentanglement compared to current state-of-the-art multimodal models. Beyond improved performance, our interpretable framework enables a deeper exploration of the underlying interactions between and within modalities in cancer biology.

Aniek Eijpe, Soufyan Lakbir, Melis Erdal Cesur, Sara P. Oliveira, Sanne Abeln, Wilson Silva• 2025

Related benchmarks

TaskDatasetResultRank
Survival PredictionTCGA (test)
BLCA Score0.679
27
Survival AnalysisTCGA-LUAD (test)--
15
Disease-Specific Survival predictionTCGA-KIRC (test)
C-index IPCW0.778
13
Disease-Specific Survival predictionTCGA Overall Average
C-index (IPCW)0.635
13
Disease-Specific Survival predictionBRCA (test)
C-index (IPCW)0.58
13
Disease-Specific Survival predictionTCGA BLCA (test)
C-index IPCW0.576
13
Disease-Specific Survival predictionBLCA (test)
C-Index0.679
6
Disease-Specific Survival predictionKIRC (test)
C-index0.752
6
Disease-Specific Survival predictionLUAD (test)
C-index0.669
6
DisentanglementBRCA (test)
DC (D1)0.505
3
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