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Exact Verification of Graph Neural Networks with Incremental Constraint Solving

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Graph neural networks (GNNs) are increasingly often employed in high-stakes applications, such as fraud detection or healthcare, but are susceptible to adversarial attacks. A number of techniques have been proposed to provide adversarial robustness guarantees, but support for commonly used aggregation functions in message-passing GNNs is lacking. In this paper, we develop an exact (sound and complete) verification method for GNNs to compute guarantees against attribute and structural perturbations that involve edge addition or deletion, subject to budget constraints. Our method employs constraint solving with bound tightening, and iteratively solves a sequence of relaxed constraint satisfaction problems while relying on incremental solving capabilities of solvers to improve efficiency. We implement GNNev, a versatile exact verifier for message-passing neural networks, which supports three aggregation functions -- sum, max and mean -- with the latter two considered here for the first time. Extensive experimental evaluation of GNNev on real-world fraud datasets (Amazon and Yelp) and biochemical datasets (MUTAG and ENZYMES) demonstrates its usability and effectiveness, as well as superior performance on node classification and competitiveness on graph classification compared to existing exact verification tools on sum-aggregated GNNs.

Minghao Liu, Chia-Hsuan Lu, Marta Kwiatkowska• 2025

Related benchmarks

TaskDatasetResultRank
Graph ClassificationMUTAG--
1103
Node Classification Robustness CertificationTexas
Solved Instances Count (All)655
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Node Classification Robustness CertificationCornell
Solved Count (All Instances)675
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Node Classification Robustness CertificationWisconsin
Time (s) (All Instances)13.86
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Node Classification Robustness CertificationCora
Solved Instances Count (All)8.12e+3
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Node Classification Robustness CertificationCiteseer
Count Solved (All Instances)3.17e+3
18
Graph ClassificationENZYMES All instances
Time (s)36.33
10
Graph ClassificationENZYMES Robust instances
Time (s)0.03
10
Node ClassificationCora
Time (s)5.06
10
Node ClassificationCora Robust instances
Time (s)4.45
10
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