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Transformer Convolutional Neural Networks for Automated Artifact Detection in Scalp EEG

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It is well known that electroencephalograms (EEGs) often contain artifacts due to muscle activity, eye blinks, and various other causes. Detecting such artifacts is an essential first step toward a correct interpretation of EEGs. Although much effort has been devoted to semi-automated and automated artifact detection in EEG, the problem of artifact detection remains challenging. In this paper, we propose a convolutional neural network (CNN) enhanced by transformers using belief matching (BM) loss for automated detection of five types of artifacts: chewing, electrode pop, eye movement, muscle, and shiver. Specifically, we apply these five detectors at individual EEG channels to distinguish artifacts from background EEG. Next, for each of these five types of artifacts, we combine the output of these channel-wise detectors to detect artifacts in multi-channel EEG segments. These segment-level classifiers can detect specific artifacts with a balanced accuracy (BAC) of 0.947, 0.735, 0.826, 0.857, and 0.655 for chewing, electrode pop, eye movement, muscle, and shiver artifacts, respectively. Finally, we combine the outputs of the five segment-level detectors to perform a combined binary classification (any artifact vs. background). The resulting detector achieves a sensitivity (SEN) of 60.4%, 51.8%, and 35.5%, at a specificity (SPE) of 95%, 97%, and 99%, respectively. This artifact detection module can reject artifact segments while only removing a small fraction of the background EEG, leading to a cleaner EEG for further analysis.

Wei Yan Peh, Yuanyuan Yao, Justin Dauwels• 2022

Related benchmarks

TaskDatasetResultRank
EEG ClassificationSEED subject-independent chronological random
Balanced Accuracy61.61
9
EEG ClassificationHMC (subject-independent chronological random)
Balanced Accuracy65.73
9
EEG ClassificationTUEV (test)
Balanced Accuracy40.87
9
EEG ClassificationWorkload
Balanced Accuracy57.93
9
EEG ClassificationTUSL (test)
Balanced Accuracy35.75
9
EEG-to-fMRI translationResting-state dataset Inter-subject (test)
Cuneus R0.218
8
EEG-to-fMRI SynthesisResting-state data Inter-subject
MSE (Cuneus)0.261
8
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