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Statistical-Neural Interaction Networks for Interpretable Mixed-Type Data Imputation

About

Real-world tabular databases routinely combine continuous measurements and categorical records, yet missing entries are pervasive and can distort downstream analysis. We propose Statistical-Neural Interaction (SNI), an interpretable mixed-type imputation framework that couples correlation-derived statistical priors with neural feature attention through a Controllable-Prior Feature Attention (CPFA) module. CPFA learns head-wise prior-strength coefficients $\{\lambda_h\}$ that softly regularize attention toward the prior while allowing data-driven deviations when nonlinear patterns appear to be present in the data. Beyond imputation, SNI aggregates attention maps into a directed feature-dependency matrix that summarizes which variables the imputer relied on, without requiring post-hoc explainers. We evaluate SNI against six baselines (Mean/Mode, MICE, KNN, MissForest, GAIN, MIWAE) on six datasets spanning ICU monitoring, population surveys, socio-economic statistics, and engineering applications. Under MCAR/strict-MAR at 30\% missingness, SNI is generally competitive on continuous metrics but is often outperformed by accuracy-first baselines (MissForest, MIWAE) on categorical variables; in return, it provides intrinsic dependency diagnostics and explicit statistical-neural trade-off parameters. We additionally report MNAR stress tests (with a mask-aware variant) and discuss computational cost, limitations -- particularly for severely imbalanced categorical targets -- and deployment scenarios where interpretability may justify the trade-off.

Ou Deng, Shoji Nishimura, Atsushi Ogihara, Qun Jin• 2026

Related benchmarks

TaskDatasetResultRank
Data ImputationeICU MNAR 10% missingness
NRMSE0.136
8
ImputationSix datasets aggregated (test)
NRMSE4.22
8
ImputationComCri MNAR 10% missingness (test)
NRMSE0.1
8
ImputationComCri MNAR 30% missingness (test)
NRMSE0.126
8
ImputationComCri 50% missingness MNAR (test)
NRMSE0.177
8
ImputationNHANES MNAR (10% missingness)
NRMSE0.082
8
ImputationNHANES MNAR (30% missingness)
NRMSE0.12
8
ImputationAutoMPG MNAR 10% missingness
NRMSE0.077
8
ImputationAutoMPG MNAR (30% missingness)
NRMSE0.109
8
ImputationAutoMPG MNAR (50% missingness)
NRMSE0.15
8
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