Bayesian Meta-Learning with Expert Feedback for Task-Shift Adaptation through Causal Embeddings
About
Meta-learning methods perform well on new within-distribution tasks but often fail when adapting to out-of-distribution target tasks, where transfer from source tasks can induce negative transfer. We propose a causally-aware Bayesian meta-learning method, by conditioning task-specific priors on precomputed latent causal task embeddings, enabling transfer based on mechanistic similarity rather than spurious correlations. Our approach explicitly considers realistic deployment settings where access to target-task data is limited, and adaptation relies on noisy (expert-provided) pairwise judgments of causal similarity between source and target tasks. We provide a theoretical analysis showing that conditioning on causal embeddings controls prior mismatch and mitigates negative transfer under task shift. Empirically, we demonstrate reductions in negative transfer and improved out-of-distribution adaptation in both controlled simulations and a large-scale real-world clinical prediction setting for cross-disease transfer, where causal embeddings align with underlying clinical mechanisms.
Related benchmarks
| Task | Dataset | Result | Rank | |
|---|---|---|---|---|
| Disease prediction | UKBB Task J44 (out-of-distribution) | AUROC0.82 | 10 | |
| Disease prediction | UKBB Task J45 (out-of-distribution) | AUROC0.622 | 10 | |
| Disease prediction | UKBB Task G45 (out-of-distribution) | AUROC0.673 | 10 | |
| Disease prediction | UKBB Task I21 (out-of-distribution) | AUROC0.714 | 10 | |
| Disease Prediction (G45) | UK Biobank G45 target tasks 2018 | AUPRC0.021 | 10 | |
| Disease Prediction (I21) | UK Biobank I21 2018 | AUPRC0.045 | 10 | |
| Disease Prediction (J44) | UK Biobank J44 2018 (target tasks) | AUPRC12.6 | 10 | |
| Disease Prediction (J45) | UK Biobank J45 target tasks 2018 | AUPRC3.8 | 10 |