Few Tokens, Big Leverage: Preserving Safety Alignment by Constraining Safety Tokens during Fine-tuning

Large language models (LLMs) often require fine-tuning (FT) to perform well on downstream tasks, but FT can induce safety-alignment drift even when the training dataset contains only benign data. Prior work shows that introducing a small fraction of harmful data can substantially compromise LLM refusal behavior, causing LLMs to comply with harmful requests. Existing defense methods often rely on model-wide interventions, such as restricting which parameters are updated or injecting additional safety data, which can limit generality and degrade downstream task performance. To address these limitations, we propose a fine-tuning framework called Preserving Safety Alignment via Constrained Tokens (PACT), which stabilizes the model's confidence on safety tokens. Our approach is motivated by the empirical observation that safety-aligned behavior is reflected in the model's token-level output confidence and is often concentrated on a small subset of safety-related tokens. During downstream fine-tuning, we regularize the fine-tuned model to match the aligned reference model's confidence on safety-related tokens at each response step, while leaving non-safety tokens largely unconstrained to allow effective task adaptation. This targeted constraint prevents alignment drift without imposing global restrictions that typically trade off with model utility.