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Integrating Meta-Features with Knowledge Graph Embeddings for Meta-Learning

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The vast collection of machine learning records available on the web presents a significant opportunity for meta-learning, where past experiments are leveraged to improve performance. Two crucial meta-learning tasks are pipeline performance estimation (PPE), which predicts pipeline performance on target datasets, and dataset performance-based similarity estimation (DPSE), which identifies datasets with similar performance patterns. Existing approaches primarily rely on dataset meta-features (e.g., number of instances, class entropy, etc.) to represent datasets numerically and approximate these meta-learning tasks. However, these approaches often overlook the wealth of past experimental results and pipeline metadata available. This limits their ability to capture dataset - pipeline interactions that reveal performance similarity patterns. In this work, we propose KGmetaSP, a knowledge-graph-embeddings approach that leverages existing experiment data to capture these interactions and improve both PPE and DPSE. We represent datasets and pipelines within a unified knowledge graph (KG) and derive embeddings that support pipeline-agnostic meta-models for PPE and distance-based retrieval for DPSE. To validate our approach, we construct a large-scale benchmark comprising 144,177 OpenML experiments, enabling a rich cross-dataset evaluation. KGmetaSP enables accurate PPE using a single pipeline-agnostic meta-model and improves DPSE over baselines. The proposed KGmetaSP, KG, and benchmark are released, establishing a new reference point for meta-learning and demonstrating how consolidating open experiment data into a unified KG advances the field.

Antonis Klironomos, Ioannis Dasoulas, Francesco Periti, Mohamed Gad-Elrab, Heiko Paulheim, Anastasia Dimou, Evgeny Kharlamov• 2026

Related benchmarks

TaskDatasetResultRank
Dataset Performance-based Similarity EstimationOpenML datasets
NDCG@10.8811
9
Dataset RetrievalOpenML ST=0.8 (unseen datasets)
Hit@185.81
9
Dataset RetrievalOpenML ST=0.9 (unseen datasets)
Hit@179.73
9
Pipeline Performance Estimation (Accuracy Target)OpenML (unseen)
MSE0.0101
8
Pipeline Performance Estimation (Precision Target)OpenML (unseen)
MSE0.0164
8
Accuracy PredictionPPE unseen pipeline configurations
MSE0.007
3
Precision PredictionPPE unseen pipeline configurations
MSE0.0131
3
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