Share your thoughts, 1 month free Claude Pro on usSee more
WorkDL logo mark

Sheaf Neural Networks on SPD Manifolds: Second-Order Geometric Representation Learning

About

Graph neural networks face two fundamental challenges rooted in the linear structure of Euclidean vector spaces: (1) Current architectures represent geometry through vectors (directions, gradients), yet many tasks require matrix-valued representations that capture relationships between directions-such as how atomic orientations covary in a molecule. These second-order representations are naturally captured by points on the symmetric positive definite matrices (SPD) manifold; (2) Standard message passing applies shared transformations across edges. Sheaf neural networks address this via edge-specific transformations, but existing formulations remain confined to vector spaces and therefore cannot propagate matrix-valued features. We address both challenges by developing the first sheaf neural network operates natively on the SPD manifold. Our key insight is that the SPD manifold admits a Lie group structure, enabling well-posed analogs of sheaf operators without projecting to Euclidean space. Theoretically, we prove that SPD-valued sheaves are strictly more expressive than Euclidean sheaves: they admit consistent configurations (global sections) that vector-valued sheaves cannot represent, directly translating to richer learned representations. Empirically, our sheaf convolution transforms effectively rank-1 directional inputs into full-rank matrices encoding local geometric structure. Our dual-stream architecture achieves SOTA on 6/7 MoleculeNet benchmarks, with the sheaf framework providing consistent depth robustness.

Yuhan Peng, Junwen Dong, Yuzhi Zeng, Hao Li, Ce Ju, Huitao Feng, Diaaeldin Taha, Anna Wienhard, Kelin Xia• 2026

Related benchmarks

TaskDatasetResultRank
Molecular property predictionMUV (test)
ROC-AUC82.3
93
ClassificationMoleculeNet BBBP (test)
ROC AUC0.774
59
molecule property predictionHIV MoleculeNet (test)
AUROC80.9
40
Molecular property predictionMoleculeNet BACE (test)
ROC-AUC89
16
Molecular property predictionMoleculeNet ClinTox (test)
ROC-AUC99.4
16
Molecular property predictionMoleculeNet SIDER (test)
ROC-AUC (%)84.3
16
Molecular property predictionMoleculeNet Tox21 (test)
ROC-AUC80.1
16
Molecular Property RegressionZINC filtered (test)
Test MAE0.258
9
Motor Imagery ClassificationBNCI Session A 2015_001 (10-Fold CV)
Accuracy83.25
4
Motor Imagery ClassificationBNCI Session B 2015_001 (10-Fold CV)
Accuracy85.58
4
Showing 10 of 11 rows

Other info

Follow for update