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UNR-Explainer: Counterfactual Explanations for Unsupervised Node Representation Learning Models

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Node representation learning, such as Graph Neural Networks (GNNs), has emerged as a pivotal method in machine learning. The demand for reliable explanation generation surges, yet unsupervised models remain underexplored. To bridge this gap, we introduce a method for generating counterfactual (CF) explanations in unsupervised node representation learning. We identify the most important subgraphs that cause a significant change in the k-nearest neighbors of a node of interest in the learned embedding space upon perturbation. The k-nearest neighbor-based CF explanation method provides simple, yet pivotal, information for understanding unsupervised downstream tasks, such as top-k link prediction and clustering. Consequently, we introduce UNR-Explainer for generating expressive CF explanations for Unsupervised Node Representation learning methods based on a Monte Carlo Tree Search (MCTS). The proposed method demonstrates superior performance on diverse datasets for unsupervised GraphSAGE and DGI.

Hyunju Kang, Geonhee Han, Hogun Park• 2026

Related benchmarks

TaskDatasetResultRank
ClusteringCora
Homogeneity (Hmg)31.5
9
ClusteringCiteseer
Homogeneity (Hmg)27.2
9
Counterfactual ExplanationTREE-CYCLES
Precision90.3
8
Unsupervised Counterfactual ExplanationCora
Validity91.1
8
Unsupervised Counterfactual ExplanationCiteseer
Validity0.778
8
Unsupervised Counterfactual ExplanationPubmed
Validity84.7
8
Counterfactual ExplanationTree-Grids
Precision0.943
8
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