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Prior-Anchored Debiasing for Long-Tailed Multi-Organ Pathology Report Generation

About

Automated pathology report generation from Whole Slide Images (WSIs) has attracted increasing attention in digital pathology. However, existing methods are predominantly developed under single-organ settings, overlooking the multi-organ scenarios encountered in clinical practice, where organ types typically follow a long-tailed distribution. To address this gap, we identify two critical biases: (1) visual representation bias, where the encoder favors head-class patterns over tail-class discriminative features, and (2) textual decoding bias, where the decoder overfits to head-class narrative patterns, yielding diagnostically unreliable outputs for tail-class organs. To mitigate these two biases, we propose a novel Prior-anchored multi-Organ pathology report Generation framework (PriOrGen). Specifically, a Visual-Prototype Anchored Bottleneck module leverages the information bottleneck principle with learnable anchor representations to selectively retain diagnostically relevant visual information while filtering out head-biased redundancy. Secondly, a Meta-Report Anchored Bank module constructs an organ-specific meta-report anchored bank and retrieves organ-faithful textual priors to steer the decoder away from head-class narrative patterns. Extensive experiments on a multi-organ pathology dataset demonstrate that our method effectively mitigates long-tail biases and achieves superior report generation performance across both head and tail organ categories compared to state-of-the-art methods.

Feng Yang, Jie Liu, Yubo Pang, Peilin Chen, Xinheng Lyu, Shiqi Wang, Howard Leung, Ping Chen• 2026

Related benchmarks

TaskDatasetResultRank
Pathology report generationML-Path BRCA (test)
BLEU Score25
9
Pathology report generationML-Path LUNG (test)
BLEU Score26.9
9
Pathology report generationML-Path KIDNEY (test)
BLEU Score (Mean)32.4
9
Pathology report generationML-Path THCA (test)
BLEU0.286
9
Pathology report generationML-Path COAD (test)
BLEU Score (Mean)0.259
9
Pathology report generationML-Path STAD (test)
BLEU Score (Mean)0.279
9
Pathology report generationML-Path MESO (test)
BLEU20.3
9
Pathology report generationML-Path CHOL (test)
BLEU Score21.3
9
Pathology report generationML-Path Mean (test)
BLEU0.273
9
Pathology report generationML-Path LIHC (test)
BLEU Score24.7
9
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