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Benchmarks
Gene Regulatory Network Inference on Simulated biological network n=2000, sp=0.9, R2=0.7
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0.53
AUPR
ASCEND
0.13896
0.24048
0.342
0.44352
Jul 5, 2026
AUPR
AUROC
F1 Score
Precision
Directional Accuracy
Runtime (s)
Updated 19d ago
Evaluation Results
Method
Method
Links
AUPR
AUROC
F1 Score
Precision
Directional Accuracy
Runtime (s)
ASCEND
n=2000, sp=0.9, R2=0.7
2026.07
0.53
0.731
0.589
0.808
0.774
0.4
GENIE3
n=2000, sp=0.9, R2=0.7
2026.07
0.428
0.732
0.358
0.471
-
149.2
WGCNA
n=2000, sp=0.9, R2=0.7
2026.07
0.224
0.577
0.219
0.25
-
0.8
ARACNe
n=2000, sp=0.9, R2=0.7
2026.07
0.154
0.5
0.173
0.146
-
110.4
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