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Genomic sequence modeling on BEND
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0.67
Gene Finding MCC
Wisteria
0.1812
0.3081
0.435
0.5619
May 7, 2026
Gene Finding MCC
Enhancer Annotation AUPRC
Chromatin Accessibility AUROC
Histone Modification AUROC
CpG Methylation AUROC
Variant Effects (Expression) AUROC
Variant Effects (Disease) AUROC
Updated 26d ago
Evaluation Results
Method
Method
Links
Gene Finding MCC
Enhancer Annotation AUPRC
Chromatin Accessibility AUROC
Histone Modification AUROC
CpG Methylation AUROC
Variant Effects (Expression) AUROC
Variant Effects (Disease) AUROC
Wisteria
Hidden dimension=768,...
2026.05
0.67
5
85
84
93
62
75
NT-v2
2026.05
0.64
5
80
76
91
48
48
GENA-LM
Architecture=BigBird c...
2026.05
0.52
3
76
78
91
49
55
DNABERT-2
2026.05
0.43
3
81
78
90
49
51
HyenaDNA
Model size=large model...
2026.05
0.35
3
84
76
91
51
45
DNABERT
Architecture=BERT base...
2026.05
0.2
3
85
79
91
60
56
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