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Genomic Understanding on GUE

81.6H3 Score

DNABERT-2

Updated 4d ago

Evaluation Results

Method
DNABERT-2 2023.06	81.6	92.67	92.38	84.91	76.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
HyenaDNA 2023.06	35.62	80.5	65.34	54.2	19.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CNN 2023.06	31.14	59.74	63.15	45.48	27.18	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	30.55	63.74	59.92	24.12	27.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	0.8017	0.5742	0.619	0.53	0.3989	0.412	0.6546	0.5707	0.8186	0.5035	0.8831	0.9434	0.6879	0.6912	0.7187	0.6296	0.5535	0.7494	0.675	0.6953	0.7618	0.6423	0.8628	0.8128	0.7349	0.508	0.6849	0.8593
NT-2500M-multi 2023.06	0.7877	0.562	0.6199	0.553	0.3649	0.4034	0.647	0.5601	0.8167	0.4913	0.9101	0.94	0.7943	0.6664	0.7028	0.5872	0.5165	0.6934	0.7033	0.7158	0.7297	0.6331	0.8376	0.7152	0.6944	0.4707	0.7304	0.8935
DNABERT-2 2023.06	0.7827	0.5257	0.5688	0.5052	0.3113	0.3627	0.6739	0.5563	0.8071	0.5043	0.8677	0.9427	0.7159	0.7199	0.7606	0.6652	0.5854	0.7743	0.6937	0.6804	0.7417	0.5676	0.8477	0.7932	0.6647	0.5266	0.7102	0.8499
NT-2500M-1000g 2023.06	0.7461	0.4408	0.5086	0.431	0.3028	0.3087	0.612	0.5236	0.7976	0.4146	0.9095	0.9307	0.758	0.6631	0.683	0.587	0.4908	0.6759	0.6739	0.6746	0.6966	0.4831	0.8002	0.7014	0.4225	0.434	0.6673	0.8578
DNABERT (3-mer) 2023.06	0.7415	0.4207	0.4849	0.4295	0.3134	0.2892	0.6012	0.5048	0.7827	0.386	0.9044	0.9361	0.6983	0.6795	0.709	0.6051	0.5303	0.6976	0.7092	0.6982	0.7815	0.4231	0.791	0.699	0.554	0.4197	0.6223	0.8414
DNABERT (5-mer) 2023.06	0.734	0.4068	0.4829	0.4065	0.3067	0.271	0.5961	0.5111	0.7727	0.3748	0.9016	0.9245	0.6951	0.6697	0.6998	0.5903	0.5295	0.6926	0.6948	0.6981	0.7679	0.4245	0.7932	0.6222	0.4992	0.4034	0.5046	0.8402
DNABERT (6-mer) 2023.06	0.731	0.4006	0.4725	0.4144	0.3227	0.2781	0.6117	0.5122	0.7926	0.3743	0.9048	0.9305	0.6156	0.6684	0.7014	0.6103	0.5189	0.7097	0.689	0.7047	0.7606	0.4442	0.7894	0.7144	0.4489	0.4248	0.555	0.8407
DNABERT (4-mer) 2023.06	0.7303	0.4188	0.4803	0.4106	0.3066	0.2531	0.5977	0.5144	0.7828	0.364	0.8954	0.9265	0.6678	0.679	0.7305	0.5952	0.5037	0.7123	0.69	0.7004	0.7425	0.4942	0.7995	0.7262	0.5179	0.4413	0.5987	0.8405
NT-500M-1000g 2023.06	0.7252	0.3937	0.4558	0.4045	0.3105	0.2616	0.5933	0.4929	0.7629	0.3679	0.8976	0.9175	0.7823	0.6364	0.7017	0.5273	0.4524	0.6282	0.667	0.6717	0.7352	0.3926	0.7549	0.647	0.3307	0.3401	0.5206	0.8097
NT-500M-human 2023.06	0.6967	0.3355	0.4414	0.3715	0.3087	0.2406	0.5835	0.4581	0.7617	0.3374	0.8771	0.9075	0.7807	0.6159	0.6675	0.5358	0.4295	0.6081	0.6345	0.6482	0.7134	0.3104	0.7504	0.6167	0.2917	0.2927	0.5082	0.7971
HyenaDNA 2023.06	-	-	-	-	-	-	-	-	-	-	47.38	52.24	5.34	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
CNN 2023.06	-	-	-	-	-	-	-	-	-	-	75.78	85.14	70.3	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	76.49	84.07	34.11	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	86.77	94.27	71.59	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
HyenaDNA 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	62.3	67.86	46.85	41.78	61.23	-	-	-	-	-	-	-	-	-	-
CNN 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	53.95	63.2	45.22	29.84	61.48	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	59.35	59.27	46.13	31.36	60.14	-	-	-	-	-	-	-	-	-	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	84.38	87.16	83.99	79.85	87.8	-	-	-	-	-	-	-	-	-	-
HyenaDNA 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	23.27	-
CNN 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	22.23	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	69.76	-
DNABERT-2 2023.06	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	71.02	-