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Genus-level 1-NN probe on DNA barcodes (unseen species)
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83.9
Accuracy
BLAST
21.084
37.392
53.7
70.008
Nov 4, 2023
Accuracy
Updated 1mo ago
Evaluation Results
Method
Method
Links
Accuracy
BLAST
#Param=N/A, TPS (seq/s...
2023.11
83.9
BarcodeBERT (4-4-4)
#Param=29.1 M, TPS (se...
2023.11
78.5
CNN encoder
#Param=1.8 M, TPS (seq...
2023.11
56
HyenaDNA-tiny (d256)
#Param=1.6 M, TPS (seq...
2023.11
50.6
DNABERT (k=6)
#Param=88.1 M, TPS (se...
2023.11
48.1
Nucleotide Transformer
#Param=55.9 M, TPS (se...
2023.11
40.1
BarcodeBERT w/o pretraining
#Param=29.1 M, TPS (se...
2023.11
37.9
DNABERT-S
#Param=117.1 M, TPS (s...
2023.11
30.6
DNABERT-2
#Param=118.9 M, TPS (s...
2023.11
23.5
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