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Phenotype Mining on BiolarkGSC+

0.603F1 Score

FastHPOCR

Updated 20d ago

Evaluation Results

Method	Links
FastHPOCR 2025.07		0.603	0.721	0.518
FastHPOCR 2025.07		0.603	-	-
RDMA (Mistral 24B) 2025.07		0.559	0.565	0.553
Mistral 24B 2025.07		0.559	-	-
GPT-5 2025.07		0.545	-	-
GPT-5 2025.07		0.525	-	-
BioBERT 2025.07		0.498	0.635	0.409
BioBERT-MRC 2025.07		0.498	-	-
i2b2 Clinical BERT 2025.07		0.491	0.599	0.417
i2b2 2025.07		0.491	-	-
Llama-3 70B 2025.07		0.484	-	-
RAG (RD / HPO) (Llama 3.3 70B) 2025.07		0.475	0.41	0.563
Llama-3 70B 2025.07		0.474	-	-
Qwen3 32B 2025.07		0.473	-	-
BioClinicalBERT 2025.07		0.441	0.459	0.424
BioClinicalBERT 2025.07		0.441	-	-
PhenoGPT 2025.07		0.427	0.676	0.312
PhenoGPT 2025.07		0.427	-	-
Qwen3 32B 2025.07		0.401	-	-
Mistral 24B 2025.07		0.398	-	-
Llama-3 8B 2025.07		0.345	-	-
Llama-3 8B 2025.07		0.331	-	-
Dictionary Match 2025.07		0.326	0.682	0.214
Dictionary 2025.07		0.326	-	-
Zero-Shot (Llama 3.3 70B) 2025.07		0	0	0
GPT-5 2025.07		0	-	-
Llama-3 70B 2025.07		0	-	-
Llama-3 8B 2025.07		0	-	-
Mistral 24B 2025.07		0	-	-
Qwen3 32B 2025.07		0	-	-