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Benchmarks
Predicting Genes on Held-out Biomedical Literature 1 sentence per unique gene (2022)
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7,931
Test Set Size
FREQ
2,410.68
3,843.84
5,277
6,710.16
Feb 6, 2024
Test Set Size
MRR
Hit Rate @10
Hit Rate @200
Updated 4d ago
Evaluation Results
Method
Method
Links
Test Set Size
MRR
Hit Rate @10
Hit Rate @200
FREQ
Type=Frequency-based b...
2024.02
7,931
-
-
0.013
MLM
retrieval_cutoff=prior...
2024.02
4,016
0.164
0.243
0.398
MCS
retrieval_cutoff=prior...
2024.02
3,770
0.167
0.243
0.404
R2E-uncor
bias_correction=false,...
2024.02
3,287
0.178
0.26
0.435
R2E-cor
bias_correction=true,...
2024.02
2,902
0.205
0.295
0.473
R2E-cor-updated
bias_correction=true,...
2024.02
2,623
0.219
0.312
0.496
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